Reports and such

SeqClusMerge: A Fragment Sequence Cluster Merging Framework - Bioinformatics thesis work

• Final thesis report
• Thesis Presentation (Powerpoint)

Bioinformatics Class Project Reports

• Phylogenetic Tree Evolutionary Distance based cluster merging technique - L529 class project report
• How clustering improves motif discovery: ACase study - L519 class project report

Computer Science Class Project Reports

• A Survey of Software Metrics - B665 bibliographical survey paper (PDF)
  • Click here for a PS version of the document
• Really short (wrap-up) description of my internship experience with Research And Technical Services (RATS) at IU

Presentations and such

You will find slide show files for presentations I have done on this page.

• Proteomics - For L529 (MS Powerpoint)
• Sensitive Profile-Profile Comparison Tool - Yona et al - Bioinfo Research Group (PDF (recommended) / PS)
• AG's Masters Thesis Presentation (MS Powerpoint)
• Hydra Project: I've been representing the IU Hydra team recently by presenting our recent work in various forums:
  • GGF 15, Boston, MA (MS Powerpoint)
  • SC | 05, Seattle, WA (MS Powerpoint)
  • NSF Teragrid Program Office Site Visit, Indianapolis, IN (MS Powerpoint)
• Survey of TeraGrid Job Distribution: Toward Specialized Serial Machines as TeraGrid Resources
  (Talk at TG'07 conference, Madison, WI given by Arvind)
• Three-Dimensional Paleohydrologic Simulation using Parallel geofe on the Teragrid Resources
  (Talk at TG'07 conference, Madison, WI given by Peng Wang, IU-UITS-RT-HPC)

Note: If you'd like to create PDF documents using Latex, you might find the following link useful: Hints on Using Latex to produce PDF - Sean Eddy.

Classes I took at IU